Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_013198 1,877,374 C→G intergenic (‑403/‑48) LGG_01847/LGG_01848 membrane protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0131981,877,3740C→G100.0% 12.3 3intergenic (‑403/‑48)LGG_01847/LGG_01848membrane protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (1/2):  ref base (0/0):  total (1/2)

AGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAAAGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAG  .  NC_013198/1877243‑1877411
                                                                                                                                   |                                     
aGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGCAAGaaaa                    >  1:778707/1‑151
                 tAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGCAAGAAAAACACGATAGCAGTagga   <  1:225470/151‑1
                  aaGGCCACTTACTCTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGCAAGAAAAACACGATAGCAGTaggag  <  1:264670/151‑1
                                                                                                                                   |                                     
AGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAAAGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAG  .  NC_013198/1877243‑1877411

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG