Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_01319824,9340C→G100.0% 1.0 1R217G (CGC→GGC) is3transposase IS5 family protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/0):  ref base (0/0):  total (1/0)

AAATCAAGCTCGGCTCAATCTAGAAGAAATGTTATTAGACATGGCTCATCAGTTGCAAATCAAGCCT.CCACGAACCTACAAACGTGAAGCAAAAGC.TAAGTGGACCGCTTTTGCTAGAAAACCGCGGCGTT.GGGCTAAGGAAACACGCAAG  .  NC_013198/24789‑24939
                                                                                                                                                    |     
aaaTCAAGCTCGGCTCAATCTAGAAGAAATGTTATTAGAAATGGTCCATAAGTGGCAAA.CAAGCCTTCCACGAACCAAAAAACG.GAAACCAAAGCCTAAGGGAACCGCTTTTGTAAGAAAAC.GCGGCCTTCGGGATAGGGAAACAGGCagc  >  1:173044/1‑149
                                                                                                                                                    |     
AAATCAAGCTCGGCTCAATCTAGAAGAAATGTTATTAGACATGGCTCATCAGTTGCAAATCAAGCCT.CCACGAACCTACAAACGTGAAGCAAAAGC.TAAGTGGACCGCTTTTGCTAGAAAACCGCGGCGTT.GGGCTAAGGAAACACGCAAG  .  NC_013198/24789‑24939

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 7 ≤  ATCG  < 8 ≤  ATCG  < 37 ≤  ATCG