Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_01319824,9230C→A100.0% 0.8 1A213D (GCT→GAT) is3transposase IS5 family protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/0):  ref base (0/0):  total (1/0)

AAATCAAGCTCGGCTCAATCTAGAAGAAATGTTATTAGACATGGCTCATCAGTTGCAAATCAAGCCT.CCACGAACCTACAAACGTGAAGCAAAAGC.TAAGTGGACCGCTTTTGCTAGAAAACCGCGGCGTT.GGGCTAAGGAAACACGCAAG  .  NC_013198/24789‑24939
                                                                                                                                         |                
aaaTCAAGCTCGGCTCAATCTAGAAGAAATGTTATTAGAAATGGTCCATAAGTGGCAAA.CAAGCCTTCCACGAACCAAAAAACG.GAAACCAAAGCCTAAGGGAACCGCTTTTGTAAGAAAAC.GCGGCCTTCGGGATAGGGAAACAGGCagc  >  1:173044/1‑149
                                                                                                                                         |                
AAATCAAGCTCGGCTCAATCTAGAAGAAATGTTATTAGACATGGCTCATCAGTTGCAAATCAAGCCT.CCACGAACCTACAAACGTGAAGCAAAAGC.TAAGTGGACCGCTTTTGCTAGAAAACCGCGGCGTT.GGGCTAAGGAAACACGCAAG  .  NC_013198/24789‑24939

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 7 ≤  ATCG  < 8 ≤  ATCG  < 37 ≤  ATCG