Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_013198	1,038,046	Δ860 bp		[LGG_01023]–is36	[LGG_01023], is35, is36

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_013198	1038046–1038902	1038905	4–860	94 [1]	[0] 93	[LGG_01023]–is36	[LGG_01023], is35, is36

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	= 1038045	1 (0.012)	91 (1.084)	43/290	0.3	coding (872/978 nt)	LGG_01023	adenine specific DNA methylase Mod
	?	NC_013198	1038906 =	0 (0.000)				intergenic (+13/‑238)	is36/LGG_01026	transposase IS4 family protein/type III restriction‑modification system methylation subunit
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TAACCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGAACCTGTCTAGTATCTGCTGAATCTGGTAGAATTGTGGAAAACCGACTGAGGAGTTTGTCATGCCAGATTATCCAAGCAATATTTCTCGAGCGCAATTTGCGTTAATACAACCTGATTTAGAAAACTTCCGCAAGCATACAAGACCGCGT  .  NC_013198/1037896‑1038195                                                                                                                                                      |                                                                                                                                                       taACCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGg                                                                                                                                                       >  1:219597‑M1/1‑150 taACCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGg                                                                                                                                                       >  2:778631‑M1/1‑150  agccatACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGgg                                                                                                                                                      <  1:784657‑M1/149‑3  aaCCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGgg                                                                                                                                                      >  1:152808‑M1/1‑149   aCCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGTAGCCCAAACCTAAGggc                                                                                                                                                     >  2:621526‑M1/1‑148   aCCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggc                                                                                                                                                     >  1:775552‑M1/1‑148   aCCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggc                                                                                                                                                     >  2:393853‑M1/1‑148   aCCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggc                                                                                                                                                     <  2:759767‑M1/151‑4    tcaTACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggct                                                                                                                                                    >  2:784424‑M1/2‑147      aTACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaac                                                                                                                                                  >  2:173521‑M1/1‑145      aTACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCAAGACAACGACTCAAATGGAGCGTGGAGAGAAGGAGATGTTAGAAGCCCAAACCTAAGggcaac                                                                                                                                                  >  2:743051‑M1/1‑145        aCATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacat                                                                                                                                                >  2:693220‑M1/1‑143        aCATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacat                                                                                                                                                >  2:709384‑M1/1‑143             ggCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaccattacgc                                                                                                                                           >  1:488795‑M1/1‑138             ggCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacga                                                                                                                                           >  1:365432‑M1/1‑138             ggCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacga                                                                                                                                           >  2:660693‑M1/1‑138             ggCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacga                                                                                                                                           >  2:947876‑M1/1‑138                ttATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatat                                                                                                                                        <  2:18826‑M1/151‑17                  aTGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGTCAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataa                                                                                                                                      >  2:163166‑M1/1‑133                   tGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataat                                                                                                                                     >  1:8846‑M1/1‑132                     cTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatat                                                                                                                                   <  1:366427‑M1/151‑22                     cTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatat                                                                                                                                   <  2:816286‑M1/151‑22                     cTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatat                                                                                                                                   <  2:887825‑M1/151‑22                        aGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattac                                                                                                                                <  1:173513‑M1/151‑25                        aGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattac                                                                                                                                <  2:950596‑M1/151‑25                        aGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattac                                                                                                                                <  2:870973‑M1/151‑25                        aGAACATAAATAAAGTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattac                                                                                                                                <  1:75205‑M1/151‑25                          aaCATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactg                                                                                                                              <  2:306880‑M1/151‑27                          aaCATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactg                                                                                                                              >  2:201012‑M1/1‑125                          aaCATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactg                                                                                                                              <  1:81988‑M1/151‑27                          aaCATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactg                                                                                                                              <  2:555035‑M1/151‑27                           aCATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgc                                                                                                                             <  1:517742‑M1/151‑28                           aCATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgc                                                                                                                             >  2:165788‑M1/1‑124                            cATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGAAGCCCAAACCTAAGggcaacattacgatataatattactgct                                                                                                                            >  2:981952‑M1/1‑123                             ataaataaATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctc                                                                                                                           <  2:905608‑M1/151‑30                                  taaatTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaat                                                                                                                      <  2:220025‑M1/151‑35                                    aatTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatgg                                                                                                                    >  1:602150‑M1/1‑115                                    aatTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatga                                                                                                                    >  2:77987‑M1/1‑115                                      ttGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaa                                                                                                                  <  1:112568‑M1/151‑39                                               ttCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccattt                                                                                                         <  1:544946‑M1/151‑48                                                               ccccaaaGCGTAATACAAATTCTTCAAAACCACACCACGCCTCAACAGGAGTGATTAGTGCAGGTGACCATAGGCACCCAAACCTAAGcccaccatttcgacataatattactgctcccactgcaaagcccatttttccaccgaaacatgg                                                                                         >  2:342847‑M1/4‑88                                                               cATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgg                                                                                         >  2:174682‑M1/1‑88                                                               cATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgg                                                                                         >  1:739186‑M1/1‑88                                                                 tCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggt                                                                                       >  2:481290‑M1/1‑86                                                                 tCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGATAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggt                                                                                       >  2:491312‑M1/1‑86                                                                      ggATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggaga                                                                                  >  1:337782‑M1/1‑81                                                                      ggATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggaga                                                                                  >  2:384295‑M1/1‑81                                                                         taataTAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatgg                                                                               >  2:547611‑M1/1‑78                                                                          aataTAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggt                                                                              >  1:358106‑M1/1‑77                                                                          aataTAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggt                                                                              >  2:504805‑M1/1‑77                                                                          aataTAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggt                                                                              >  1:96958‑M1/1‑77                                                                           atatAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtc                                                                             >  2:962143‑M1/1‑76                                                                           atatAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtc                                                                             >  2:423206‑M1/1‑76                                                                           atatAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtc                                                                             >  2:299849‑M1/1‑76                                                                                aaCTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaag                                                                        <  1:292699‑M1/151‑81                                                                                 aCTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaaga                                                                       <  1:83379‑M1/151‑82                                                                                                 cAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaa                                                       >  2:590624‑M1/1‑54                                                                                                 cAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaa                                                       <  2:219604‑M1/151‑98                                                                                                     gACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatca                                                   >  2:479123‑M1/1‑50                                                                                                     gACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatca                                                   >  2:345731‑M1/1‑50                                                                                                       cTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaa                                                 >  1:603847‑M1/1‑48                                                                                                       cTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaa                                                 >  2:369452‑M1/1‑48                                                                                                         cAAATGGATCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgcttccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatc                                               <  2:728791‑M1/151‑106                                                                                                         cAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatc                                               >  2:356327‑M1/1‑46                                                                                                         cAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatc                                               >  2:538339‑M1/1‑46                                                                                                         cAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatc                                               >  1:936441‑M1/1‑46                                                                                                              ggAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggag                                          >  1:475848‑M1/1‑41                                                                                                                 gCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaag                                       <  2:358239‑M1/151‑114                                                                                                                   gTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagtt                                     >  2:930380‑M1/1‑36                                                                                                                   gTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagtt                                     >  1:529234‑M1/1‑36                                                                                                                   gTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagtt                                     >  2:505853‑M1/1‑36                                                                                                                   gTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagtt                                     >  1:741489‑M1/1‑36                                                                                                                      gagaGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtt                                  >  1:182806‑M1/1‑33                                                                                                                      gagaGCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtt                                  >  2:775372‑M1/1‑33                                                                                                                        gagCAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttt                                >  2:65050‑M1/1‑31                                                                                                                           cAGGAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaa                             >  1:397977‑M1/1‑28                                                                                                                             ggAGATGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagc                           <  1:813369‑M1/151‑126                                                                                                                                gaTGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctg                        >  2:319607‑M1/1‑23                                                                                                                                gaTGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctg                        >  1:842922‑M1/1‑23                                                                                                                                gaTGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctg                        >  2:133958‑M1/1‑23                                                                                                                                gaTGTTAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctg                        >  1:355390‑M1/1‑23                                                                                                                                     tAGGAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataat                   >  2:481809‑M1/1‑18                                                                                                                                       ggAGCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattc                 <  2:950830‑M1/151‑136                                                                                                                                          gCCCAAACCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctgg              >  1:374190‑M1/1‑13                                                                                                                                              aaaCCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatc          <  2:731897‑M1/151‑143                                                                                                                                                aCCTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcat        >  1:351973‑M1/1‑7                                                                                                                                                 cttAAGAACCTGTCTAGTATCTGCTGAATCTGGTAGAATTGTGGAAAACCGACTGAGGAGTTTGTCATGCCAGATTATCCAAGCAATATTTCTCGAGCGCAATTTGCGTTAATACAACCTGATTTAGAAAACTTCCGCAAGCATACAAGAc       >  1:335162/3‑151                                                                                                                                                 ccTAAGggcaacattacgatataatattactgcttccaatggaaagaccattttcccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatc       >  2:193111‑M1/1‑6                                                                                                                                                 ccTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatc       >  1:945815‑M1/1‑6                                                                                                                                                 ccTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatc       >  1:385506‑M1/1‑6                                                                                                                                                 ccTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatc       >  2:720685‑M1/1‑6                                                                                                                                                 ccTAAGggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatc       >  1:548281‑M1/1‑6                                                                                                                                                      gggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatcagaaa  <  1:363712‑M1/151‑151                                                                                                                                                      gggcaacattacgatataatattactgctcccaatggaaagaccatttttccacctaaaaatgggtggagatggtctaaagatacaattaatgaaaaaatcaaatctggagaagttgtttttaagcctgataattctggaatcatcagaaa  >  1:215581‑M1/1‑1                                                                                                                                                      |                                                                                                                                                       TAACCATACATTGGCTTATGCTAAGAACATAAATAAATTGAACCCGTTCTTTTTAAAGAGAACATCAAAGGATAATATAAACTATTCAAATCCAGACAACGACTCAAATGGAGCGTGGAGAGCAGGAGATGTTAGGAGCCCAAACCTAAGAACCTGTCTAGTATCTGCTGAATCTGGTAGAATTGTGGAAAACCGACTGAGGAGTTTGTCATGCCAGATTATCCAAGCAATATTTCTCGAGCGCAATTTGCGTTAATACAACCTGATTTAGAAAACTTCCGCAAGCATACAAGACCGCGT  .  NC_013198/1037896‑1038195 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG