| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_013198 | 1,877,343 | 2 bp→AA | intergenic (‑372/‑78) | LGG_01847/LGG_01848 | membrane protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_013198 | 1,877,343 | 0 | T→A | 100.0% | 30.1 | 8 | intergenic (‑372/‑79) | LGG_01847/LGG_01848 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (2/6): ref base (0/0): total (2/6) | ||||||||||
| * | NC_013198 | 1,877,344 | 0 | G→A | 100.0% | 29.7 | 8 | intergenic (‑373/‑78) | LGG_01847/LGG_01848 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (2/6): ref base (0/0): total (2/6) | ||||||||||
TTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAAAGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAGGAATTCGCTCTTGTCACCTATAGTA > NC_013198/1877259‑1877436
||
ttAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGa < 10:193048/101‑1
ttAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGa < 21:193048/101‑1
gCCGCTTACACTCCGGTCCCTAAGCGCGCCGGTTCGCGCTCAC..CATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCtt < 19:986481/101‑1
gCCGCTTACACTCCGGTCCCTAAGCGCGCCGGTTCGCGCTCAC..CATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCtt < 8:986481/101‑1
ttCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTa > 12:291985/1‑101
ttCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTa > 1:291985/1‑101
aGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGc < 11:966870/101‑1
aGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGc < 22:966870/101‑1
tCTGAGAAGAAAGAAGTGGAGCGAACACCTTCTTGCTAGAATGTTAATTTCAAGAAAAACACGATAGCAGTAGGGGGAATTCGCTCTTGTCACCTATAGTa < 14:1198597/101‑1
tCTGAGAAGAAAGAAGTGGAGCGAACACCTTCTTGCTAGAATGTTAATTTCAAGAAAAACACGATAGCAGTAGGGGGAATTCGCTCTTGTCACCTATAGTa < 3:1198597/101‑1
||
TTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAAAGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAGGAATTCGCTCTTGTCACCTATAGTA > NC_013198/1877259‑1877436
Base quality scores:
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 30 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|