Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_013198309,4420G→T100.0% 1.9 2T25K (ACA→AAA) LGG_00305hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/2):  ref base (0/0):  total (0/2)

CTTTGTTT.AGTTTTGAGGGGATTACCCTCAAGCACCCTAGCGGGTACGACTTTGTTCTTTGAAAACTGGATATCATTGTTGTAAATGTTTTAAATTGCCG  >  NC_013198/309365‑309464
                                                                              |                      
ttttGTTTTAGTTTTGAGGGGATTCCCCTCAAGCACCCTAGCGGGTACGACTTTGTTCTTTGAAAACTGGATATCATTTTTGTAAATGTTTTAAATTGCCg  <  15:62920/100‑1
ttttGTTTTAGTTTTGAGGGGATTCCCCTCAAGCACCCTAGCGGGTACGACTTTGTTCTTTGAAAACTGGATATCATTTTTGTAAATGTTTTAAATTGCCg  <  31:62920/100‑1
                                                                              |                      
CTTTGTTT.AGTTTTGAGGGGATTACCCTCAAGCACCCTAGCGGGTACGACTTTGTTCTTTGAAAACTGGATATCATTGTTGTAAATGTTTTAAATTGCCG  >  NC_013198/309365‑309464

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG