Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_013198 1,873,856 A→G intergenic (‑52/‑49) LGG_01843/LGG_01844 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0131981,873,8560A→G100.0% 15.0 4intergenic (‑52/‑49)LGG_01843/LGG_01844hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (4/0):  ref base (0/0):  total (4/0)

CCTTACACGCAGACTTCTGCGCCGGCGAACG.GTCGGGCAACGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTT  >  NC_013198/1873817‑1873916
                                        |                                                            
ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGAGCGTGATGGCCGGGCtt  >  19:178006/1‑101
ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGAGCGTGATGGCCGGGCtt  >  5:178006/1‑101
ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAACCGGATCATAAGTGGCCTTGAGCGTGATGACCGGGCtt  >  18:714210/1‑101
ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAACCGGATCATAAGTGGCCTTGAGCGTGATGACCGGGCtt  >  4:714210/1‑101
                                        |                                                            
CCTTACACGCAGACTTCTGCGCCGGCGAACG.GTCGGGCAACGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTT  >  NC_013198/1873817‑1873916

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 19 ≤  ATCG  < 26 ≤  ATCG  < 37 ≤  ATCG