Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_013198	596,201	1	.→C	100.0%	9.1	2	intergenic (‑114/+92)	LGG_00589/LGG_00590	hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (2/0):  ref base (0/0):  total (2/0)

ACCCACTTAAACTTTACGCCATGC.TTGTTGATCAAACTTTCGAATAAGCCAACCTTTAAATCAAGCCATTAAAAAACCTCGCAAACACGTCAAGCGCATTTGC  >  NC_013198/596178‑596280                         |                                                                                aCCCACTTAATCTTTACGCCATGC.GAGTTGATCACACTTTCGACTCAGCCACCCTTTAATTCAAGGCATTACAAAACCTCGCAAACCCGTCAAGTGCAttt    >  12:290077/1‑101 aCCCACTTAATCTTTACGCCATGC.GAGTTGATCACACTTTCGACTCAGCCACCCTTTAATTCAAGGCATTACAAAACCTCGCAAACCCGTCAAGTGCAttt    >  26:290077/1‑101    cACTTAAACTTTACGCCATGCCTTGTTGATCAAACTTTCGAATAAGCCAACCTTTAAATCAAGCCATTAAAAAACCTCGCAAACACGTCAAGCGCATTTGc  >  19:1224994/1‑101    cACTTAAACTTTACGCCATGCCTTGTTGATCAAACTTTCGAATAAGCCAACCTTTAAATCAAGCCATTAAAAAACCTCGCAAACACGTCAAGCGCATTTGc  >  5:1224994/1‑101                         |                                                                                ACCCACTTAAACTTTACGCCATGC.TTGTTGATCAAACTTTCGAATAAGCCAACCTTTAAATCAAGCCATTAAAAAACCTCGCAAACACGTCAAGCGCATTTGC  >  NC_013198/596178‑596280 Base quality scores:  ATCG  < 3 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 37 ≤  ATCG  < 41 ≤  ATCG