Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_013198	1,873,879	0	T→C	100.0%	1.0	4	intergenic (‑75/‑26)	LGG_01843/LGG_01844	hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (2/0):  ref base (2/0):  total (4/0)

CCTTACACGCAGACTTCTGCGCCGGCGAACG.GTCGGGCAACGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTT  >  NC_013198/1873817‑1873916                                                                |                                      ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGAGCGTGATGGCCGGGCtt  >  19:178006/1‑101 ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGAGCGTGATGGCCGGGCtt  >  5:178006/1‑101 ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAACCGGATCATAAGTGGCCTTGAGCGTGATGACCGGGCtt  >  18:714210/1‑101 ccTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAACCGGATCATAAGTGGCCTTGAGCGTGATGACCGGGCtt  >  4:714210/1‑101                                                                |                                      CCTTACACGCAGACTTCTGCGCCGGCGAACG.GTCGGGCAACGTGAACCGACGCGCTTAGAAATCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTT  >  NC_013198/1873817‑1873916 Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 19 ≤  ATCG  < 26 ≤  ATCG  < 37 ≤  ATCG