Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_013198	1,873,078	Δ1 bp	coding (727/795 nt)	LGG_01843	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_013198	1,873,078	0	T→.	100.0%	229.5	84	coding (727/795 nt)	LGG_01843	hypothetical protein
Reads supporting (aligned to +/- strand):  new base (24/42):  ref base (2/16):  total (26/58)

ATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTAGGCGGTGAT.GGCC.GGGCTTTGGCCATTGCGGCTGAGGTCCTTACACGCAGACTTCTGCGCCGGCGAACGCGTT.T.ATGAGCGTGAACCGACGCGCTTAGAAACC  >  NC_013198/1872981‑1873161                                                                                                        |                                                                                      aTGTGCAGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                      <  10:794869/101‑1 aTGTGCAGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                      <  24:794869/101‑1 aTGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                      >  24:774143/1‑101 aTGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                      >  10:774143/1‑101 aTGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGG.GAT.GGGC.TGGGGTTGGcc                                                                                   >  12:1225709/1‑101 aTGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGG.GAT.GGGC.TGGGGTTGGcc                                                                                   >  26:1225709/1‑101 aTGCGCAGGCTTCTGCGCTGGCGAACGCGTTTATG...AGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGC.GTGAT.GACC.GGGTTTTggt                                                                                    <  3:6558/101‑2 aTGCGCAGGCTTCTGCGCTGGCGAACGCGTTTATG...AGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGC.GTGAT.GACC.GGGTTTTggt                                                                                    <  17:6558/101‑2  tgtgCAGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTgg                                                                                     <  10:994983/101‑1  tgtgCAGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTgg                                                                                     <  24:994983/101‑1   gtgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                                 <  12:724916/101‑1   gtgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                                 >  11:921461/1‑101   gtgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                                 <  26:724916/101‑1   gtgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                                 >  25:921461/1‑101   gtgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGAGGCCTTTGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                                 >  6:1099241/1‑101   gtgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGAGGCCTTTGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                                 >  20:1099241/1‑101    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  25:672434/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  2:1073673/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  16:1073673/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  19:760361/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  18:787416/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  4:787416/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  5:760361/101‑1    tgCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                                <  11:672434/101‑1     gCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                               >  23:1031894/1‑101     gCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                               <  25:1023248/101‑1     gCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                               >  21:784804/1‑101     gCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                               <  11:1023248/101‑1     gCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                               >  7:784804/1‑101     gCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                               >  9:1031894/1‑101      cAGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                                 <  5:281514/101‑1      cAGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                                 <  19:281514/101‑1      cAGGTTTCTGCGCTGGCGAACGCGTTTATG...AGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGC.GTGAT.GACC.GGGTTTTGGTCATTg                                                                               <  12:1021358/101‑1      cAGGTTTCTGCGCTGGCGAACGCGTTTATG...AGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGC.GTGAT.GACC.GGGTTTTGGTCATTg                                                                               <  26:1021358/101‑1      cAGGTTGCTGGGCTGGGGAACGCGTT.ATGGTGAGCGTGATCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                                 <  13:364747/101‑1      cAGGTTGCTGGGCTGGGGAACGCGTT.ATGGTGAGCGTGATCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                                 <  27:364747/101‑1       cggTTGCTGCGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                                <  2:780505/100‑1       cggTTGCTGCGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                                <  16:780505/100‑1       aGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                                <  28:17939/101‑1       aGGTTTCTGGGCTGGTGAACGCGTT.ATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                                <  14:17939/101‑1       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             <  25:699631/101‑1       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             >  9:343961/1‑101       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             <  24:1143041/101‑1       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             >  23:343961/1‑101       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             >  3:1065750/1‑101       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             <  11:699631/101‑1       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             <  10:1143041/101‑1       aGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                             >  17:1065750/1‑101                 gCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                   >  11:693900/1‑101                 gCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                   >  17:1167374/1‑101                 gCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                   >  3:1167374/1‑101                 gCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                   >  25:693900/1‑101                  cTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCt                                                                  <  20:590380/101‑1                  cTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCt                                                                  <  11:1177497/101‑1                  cTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCt                                                                  <  25:1177497/101‑1                  cTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCt                                                                  <  6:590380/101‑1                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 <  12:622383/101‑1                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 <  26:622383/101‑1                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 >  15:1179922/1‑101                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 <  26:540362/101‑1                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 <  12:540362/101‑1                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 >  5:948497/1‑101                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 >  19:948497/1‑101                   tGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                                 >  1:1179922/1‑101                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                <  10:882873/101‑1                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                <  7:421158/101‑1                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                >  18:725169/1‑101                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                <  21:421158/101‑1                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                >  27:411206/1‑101                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                >  13:411206/1‑101                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                <  24:882873/101‑1                    ggCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                                >  4:725169/1‑101                     gCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                               <  6:440190/101‑1                     gCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                               <  21:863562/101‑1                     gCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                               <  24:104381/101‑1                     gCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                               <  20:440190/101‑1                     gCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                               <  10:104381/101‑1                     gCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                               <  7:863562/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTTGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             >  4:1023434/1‑101                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTTGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             >  18:1023434/1‑101                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  7:78900/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  21:78900/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  5:511503/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  5:105452/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  4:562843/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  18:562843/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  19:105452/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                             <  19:511503/101‑1                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGGGTAAATGGCCTTTGG.GGTGATTGGCT.GGGCTTTGGC.ATTGCGCCCAAGGGCCTTacac                                                             >  15:32429/1‑101                       gAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGGGTAAATGGCCTTTGG.GGTGATTGGCT.GGGCTTTGGC.ATTGCGCCCAAGGGCCTTacac                                                             >  1:32429/1‑101                        aaCGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacact                                                            >  6:214165/1‑100                        aaCGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacact                                                            >  20:214165/1‑100                                                                                       gTGAT.GACC.GGGCTTTGGTCATTGCGCCCAAGGTCCTTATGGGCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAAcc  <  12:688525/101‑1                                                                                       gTGAT.GACC.GGGCTTTGGTCATTGCGCCCAAGGTCCTTATGGGCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAAcc  <  26:688525/101‑1                                                                                                        |                                                                                      ATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTAGGCGGTGAT.GGCC.GGGCTTTGGCCATTGCGGCTGAGGTCCTTACACGCAGACTTCTGCGCCGGCGAACGCGTT.T.ATGAGCGTGAACCGACGCGCTTAGAAACC  >  NC_013198/1872981‑1873161 Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG