Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_013198 1,873,063 Δ1 bp coding (742/795 nt) LGG_01843 hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0131981,873,0630G→.100.0% 591.5 122coding (742/795 nt)LGG_01843hypothetical protein
Reads supporting (aligned to +/- strand):  new base (46/72):  ref base (0/4):  total (46/76)

Only 100 of 132 total aligned reads displayed.

GCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTAGGCGGTGAT.GGCC.GGGCTTTGGCCATTGCGGCTGAGGTCCTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAACC  >  NC_013198/1872968‑1873161
                                                                                                  |                                                                                                    
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               <  1:252566/101‑1
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               <  4:894846/101‑1
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               <  18:894846/101‑1
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               <  1:718395/101‑1
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               <  15:718395/101‑1
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               >  21:142732/1‑101
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               >  7:142732/1‑101
gcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.gg                                                                                               <  15:252566/101‑1
 cccAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGc                                                                                              <  17:912076/101‑1
 cccAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGc                                                                                              <  3:912076/101‑1
  ccAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGcc                                                                                             <  6:188605/101‑1
  ccAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGcc                                                                                             <  3:997065/101‑1
  ccAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGcc                                                                                             <  17:997065/101‑1
  ccAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGcc                                                                                             <  20:188605/101‑1
   cAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGGGGCCTTGGGCG.TGAT.GGcct                                                                                            >  21:818370/1‑100
   cAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGGGGCCTTGGGCG.TGAT.GGcct                                                                                            >  7:818370/1‑100
        tCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCt                                                                                       <  5:307005/101‑1
        tCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCt                                                                                       <  19:307005/101‑1
        tCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCCGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCt                                                                                       <  23:859305/101‑1
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGc                                                                                        >  23:823525/1‑101
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGc                                                                                        >  9:823525/1‑101
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCtt                                                                                      >  21:1068231/1‑101
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCtt                                                                                      >  19:161165/1‑101
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCtt                                                                                      >  7:1068231/1‑101
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCtt                                                                                      <  21:397990/101‑1
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCtt                                                                                      <  7:397990/101‑1
         ccTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCtt                                                                                      >  5:161165/1‑101
          cTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCttg                                                                                     >  19:601636/1‑100
          cTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCttg                                                                                     >  2:41119/1‑100
          cTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCttg                                                                                     >  18:1023736/1‑100
          cTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCttg                                                                                     >  4:1023736/1‑100
          cTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCttg                                                                                     >  16:41119/1‑100
          cTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCttg                                                                                     >  5:601636/1‑100
             aTGTGCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                    <  24:794869/101‑1
             aTGTGCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                    <  10:794869/101‑1
             aTGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                    >  24:774143/1‑101
             aTGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTg                                                                                    >  10:774143/1‑101
             aTGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGG.GAT.GGGC.TGGGGTTGGcc                                                                                 >  26:1225709/1‑101
             aTGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGG.GAT.GGGC.TGGGGTTGGcc                                                                                 >  12:1225709/1‑101
              tgtgCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTgg                                                                                   <  10:994983/101‑1
              tgtgCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTgg                                                                                   <  24:994983/101‑1
               gtgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                               >  25:921461/1‑101
               gtgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                               >  11:921461/1‑101
               gtgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                               <  26:724916/101‑1
               gtgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAt                                                                               <  12:724916/101‑1
                tgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                              <  19:760361/101‑1
                tgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                              <  5:760361/101‑1
                tgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                              <  16:1073673/101‑1
                tgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                              <  2:1073673/101‑1
                tgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                              <  4:787416/101‑1
                tgCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCAtt                                                                              <  18:787416/101‑1
                 gCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                             <  25:1023248/101‑1
                 gCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                             >  7:784804/1‑101
                 gCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                             >  9:1031894/1‑101
                 gCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                             >  23:1031894/1‑101
                 gCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                             <  11:1023248/101‑1
                 gCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTg                                                                             >  21:784804/1‑101
                  cAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                               <  5:281514/101‑1
                  cAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                               <  19:281514/101‑1
                  cAGGTTGCTGGGCTGGGGAACGCGTTATGGTGAGCGTGATCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                               <  13:364747/101‑1
                  cAGGTTGCTGGGCTGGGGAACGCGTTATGGTGAGCGTGATCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAt                                                                               <  27:364747/101‑1
                   cggTTGCTGCGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                              <  16:780505/100‑1
                   cggTTGCTGCGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                              <  2:780505/100‑1
                   aGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                              <  14:17939/101‑1
                   aGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCG.TGAT.GACC.GGGCTTTGGTCAtt                                                                              <  28:17939/101‑1
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           <  24:1143041/101‑1
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           <  10:1143041/101‑1
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           >  9:343961/1‑101
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           <  11:699631/101‑1
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           >  17:1065750/1‑101
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           >  3:1065750/1‑101
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           <  25:699631/101‑1
                   aGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCg                                                                           >  23:343961/1‑101
                             gCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                 >  3:1167374/1‑101
                             gCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                 >  11:693900/1‑101
                             gCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                 >  17:1167374/1‑101
                             gCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTcc                                                                 >  25:693900/1‑101
                              cTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCt                                                                <  11:1177497/101‑1
                              cTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCt                                                                <  25:1177497/101‑1
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               <  12:540362/101‑1
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               <  12:622383/101‑1
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               <  26:622383/101‑1
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               <  26:540362/101‑1
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               >  15:1179922/1‑101
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               >  19:948497/1‑101
                               tGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCtt                                                               >  5:948497/1‑101
                                ggCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                              >  27:411206/1‑101
                                ggCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                              >  13:411206/1‑101
                                ggCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                              >  4:725169/1‑101
                                ggCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTa                                                              >  18:725169/1‑101
                                 gCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                             <  20:440190/101‑1
                                 gCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                             <  6:440190/101‑1
                                 gCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTac                                                             <  10:104381/101‑1
                                   gAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTTGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                           >  18:1023434/1‑101
                                   gAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTTGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                           >  4:1023434/1‑101
                                   gAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                           <  7:78900/101‑1
                                   gAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacac                                                           <  21:78900/101‑1
                                   gAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGGGTAAATGGCCTTTGG.GGTGATTGGCT.GGGCTTTGGC.ATTGCGCCCAAGGGCCTTacac                                                           >  1:32429/1‑101
                                    aaCGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacact                                                          >  6:214165/1‑100
                                    aaCGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCG.TGAT.GGCCTGGGCTT.GGCCATTGCGACCAAGGTCCTTacact                                                          >  20:214165/1‑100
                                                                                                  |                                                                                                    
GCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATG...AGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTAGGCGGTGAT.GGCC.GGGCTTTGGCCATTGCGGCTGAGGTCCTTACACGCAGACTTCTGCGCCGGCGAACGCGTTTATGAGCGTGAACCGACGCGCTTAGAAACC  >  NC_013198/1872968‑1873161

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG