Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_013198 1,873,252 3 bp→AT coding (551‑553/795 nt) LGG_01843 hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0131981,873,2520T→.100.0% 29.9 6coding (553/795 nt)LGG_01843hypothetical protein
Reads supporting (aligned to +/- strand):  new base (0/6):  ref base (0/0):  total (0/6)
*NC_0131981,873,2530C→A100.0% 20.9 6L184L (CTG→CTT) LGG_01843hypothetical protein
Reads supporting (aligned to +/- strand):  new base (0/6):  ref base (0/0):  total (0/6)
*NC_0131981,873,2540A→T100.0% 23.5 6L184Q (CTG→CAG) LGG_01843hypothetical protein
Reads supporting (aligned to +/- strand):  new base (0/6):  ref base (0/0):  total (0/6)

GCGCTCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGATCGCGTTTCAGAGCGTGAACCGGCGCGTTCAGAAGTCGGAGTGTAAGTGGCCTCAGACGTGAT  >  NC_013198/1873206‑1873307
                                              ||                                                      
gcgcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGTGAt  <  17:708253/101‑1
gcgcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGTGAt  <  18:273237/101‑1
gcgcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGTGAt  <  24:609387/101‑1
gcgcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGTGAt  <  2:708253/101‑1
gcgcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGTGAt  <  3:273237/101‑1
gcgcCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTT.ATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTGGGCGTGAt  <  9:609387/101‑1
                                              ||                                                      
GCGCTCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGATCGCGTTTCAGAGCGTGAACCGGCGCGTTCAGAAGTCGGAGTGTAAGTGGCCTCAGACGTGAT  >  NC_013198/1873206‑1873307

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG