| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_013198 | 1,873,110 | 3 bp→TCC | coding (693‑695/795 nt) | LGG_01843 | hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_013198 | 1,873,110 | 0 | C→T | 100.0% | 32.6 | 12 | S232N (AGT→AAT) | LGG_01843 | hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (6/4): ref base (0/2): total (6/6) | ||||||||||
| * | NC_013198 | 1,873,111 | 0 | T→C | 100.0% | 11.9 | 10 | S232G (AGT→GGT) | LGG_01843 | hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (4/2): ref base (2/2): total (6/4) | ||||||||||
| * | NC_013198 | 1,873,112 | 0 | T→C | 100.0% | 10.6 | 10 | R231R (AGA→AGG) | LGG_01843 | hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (4/2): ref base (2/2): total (6/4) | ||||||||||
TTATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTAGGCGGTGATGGCCGGGCTTTGGCCATTGCGGCTGAGGTCCTTACACGCAGACTTCTGCGCCGGCGAACGCGTT.T.ATGAGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGCGTGATGACCGGGTTTTGGTCATTGCGC > NC_013198/1873010‑1873209
|||
ttATGAGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGC.GTGATGGCCCGCTCTTGGCCATTGCGCTTAAGCTCCTTACACGCAGACt < 19:1229565/101‑1
ttATGAGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGC.GTGATGGCCCGCTCTTGGCCATTGCGCTTAAGCTCCTTACACGCAGACt < 4:1229565/101‑1
gATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCgg < 13:724536/101‑1
gATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCgg < 28:724536/101‑1
aaGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGAc > 11:247060/2‑101
aaGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGAc > 26:247060/2‑101
ccTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCgggc < 12:640023/101‑2
ccTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCgggc > 16:541764/1‑100
ccTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCgggc > 1:541764/1‑100
ccTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCgggc > 24:486295/1‑100
ccTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCgggc < 27:640023/101‑2
ccTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCgggc > 9:486295/1‑100
ttCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTgcgc < 23:45488/101‑1
ttCTGGGCTGGCGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTgcgc < 8:45488/101‑1
|||
TTATGAGCGTGAACCGGCGCGCTTAGGGATCGGAGTGTAAGTGGCCTTAGGCGGTGATGGCCGGGCTTTGGCCATTGCGGCTGAGGTCCTTACACGCAGACTTCTGCGCCGGCGAACGCGTT.T.ATGAGCGTGAACCGACGCGCTTAGAAACCGGAGCATAAGTGGCCTTGAGCGTGATGACCGGGTTTTGGTCATTGCGC > NC_013198/1873010‑1873209
Base quality scores:
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|